3000 trades in 6 months is about 25 trades a day.
That's about 1 trade every 15 minutes.
That may or may not be excessive.
I suppose if you have limited funds and the trades are over-lapping and your limited funds prevent you from opening all of the positions.
I'll just take your word for it that 3000 trades is too much.
The fact is, if you cut out some of the trades, the trades that get cut out will definitely yield different results than if you executed all of the trades. However, there is no way to know if the trades you eliminate will skew the results to the good or bad side.
For valid trading tests, you must employ a money management scheme so that you do not open positions beyond what you can afford.
Ed